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Found 84 result(s)
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Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library. It is written in C++ and easily scales to massive networks with hundreds of millions of nodes, and billions of edges. It efficiently manipulates large graphs, calculates structural properties, generates regular and random graphs, and supports attributes on nodes and edges. SNAP is also available through the NodeXL which is a graphical front-end that integrates network analysis into Microsoft Office and Excel. The SNAP library is being actively developed since 2004 and is organically growing as a result of our research pursuits in analysis of large social and information networks. Largest network we analyzed so far using the library was the Microsoft Instant Messenger network from 2006 with 240 million nodes and 1.3 billion edges.
The datasets available on the website were mostly collected (scraped) for the purposes of our research.
The website was launched in July 2009.
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<<<!!!<<< 2019-12-23: the repository is offline >>>!!!>>> Introduction of genome-scale metabolic network:
The completion of genome sequencing and subsequent functional annotation for a great number of species enables the reconstruction of genome-scale metabolic networks. These networks, together with in silico network analysis methods such as the constraint based methods (CBM) and graph theory methods, can provide us systems level understanding of cellular metabolism. Further more, they can be applied to many predictions of real biological application such as: gene essentiality analysis, drug target discovery and metabolic engineering
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This is the KONECT project, a project in the area of network science with the goal to collect network datasets, analyse them, and make available all analyses online. KONECT stands for Koblenz Network Collection, as the project has roots at the University of Koblenz–Landau in Germany. All source code is made available as Free Software, and includes a network analysis toolbox for GNU Octave, a network extraction library, as well as code to generate these web pages, including all statistics and plots.
KONECT contains over a hundred network datasets of various types, including directed, undirected, bipartite, weighted, unweighted, signed and rating networks. The networks of KONECT are collected from many diverse areas such as social networks, hyperlink networks, authorship networks, physical networks, interaction networks and communication networks. The KONECT project has developed network analysis tools which are used to compute network statistics, to draw plots and to implement various link prediction algorithms. The result of these analyses are presented on these pages. Whenever we are allowed to do so, we provide a download of the networks.
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Network Repository is the first interactive data repository for graph and network data. It hosts graph and network datasets, containing hundreds of real-world networks and benchmark datasets. Unlike other data repositories, Network Repository provides interactive analysis and visualization capabilities to allow researchers to explore, compare, and investigate graph data in real-time on the web.
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The Ministry for the Environment, Land and Sea has promoted the project "Environment 2010" which plays a strong team move to support the National Strategy for Biodiversity . The crux of the system is the National Biodiversity Network (NNB), a network of Centers of Excellence (CoE) and National Focal Point (FP), accredited to international and national level for the management, sharing and information about data on biodiversity.
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<<<!!!<<< This repository is no longer available. >>>!!!>>>
TeachingWithData.org is a portal where faculty can find resources and ideas to reduce the challenges of bringing real data into post-secondary classes. It allows faculty to introduce and build students' quantitative reasoning abilities with readily available, user-friendly, data-driven teaching materials.
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!!! >>> the repository is offline, data can be found here: https://osf.io/gjp53/ <<< !!! Our lab investigates how cognition manifests in, and is influenced by, the social contexts in which it occurs. We focus: 1) on how conversational interactions can reshape memory, by promoting shared remembering and shared forgetting, and 2) on how socio-cognitive processes affect the formation of collective memories and beliefs, and the dynamics of collective decisions. In exploring these issues, while maintaining high ecological validity, our lab integrates a wide range of methodologies, including laboratory experiments, field studies, social network analysis, and agent-based simulations.
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CRAN is a network of ftp and web servers around the world that store identical, up-to-date, versions of code and documentation for R. R is ‘GNU S’, a freely available language and environment for statistical computing and graphics which provides a wide variety of statistical and graphical techniques: linear and nonlinear modelling, statistical tests, time series analysis, classification, clustering, etc. Please consult the R project homepage for further information.
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The California Coastal Atlas is an experiment in the creation of a new information resource for the description, analysis and understanding of natural and human processes affecting the coast of California.
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NatureServe and its network of member programs are a leading source for reliable scientific information about species and ecosystems of the Western Hemisphere. This site serves as a portal for accessing several types of publicly available biodiversity data.
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The Database contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents (small molecule perturbagens, cells, antibodies, and proteins) and experimental and data analysis protocols.
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Welcome to the digital flora of Panama. You may access the taxonomic list of lianas, common trees, shrubs and palms by species name, family, or by their common names in Panama. There are for each species: a botanical description, photos, scans, drawings, and a distribution map showing its presence or absence in a series of floristic inventories and plots established by the Center for Tropical Forest Science in the Panama Canal watershed. A map of its distribution in the countries of Panama and its neighbor Costa Rica includes data from the Global Biodiversity Information Facility (GBIF) network (https://www.gbif.org/). Some families include descriptions.
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The Groundwater Information Network is developed to improve knowledge of groundwater systems, and enhance groundwater management, through increased access to groundwater information. GIN connects a variety of groundwater information from authoritative sources, such as water well databases, water monitoring data, aquifer and geology maps, and related publications. Provincial and territorial collaborators include British Columbia, Alberta, Saskatchewan, Manitoba, Ontario, Québec, Nova Scotia, Yukon and Newfoundland and Labrador; international collaborators include the USGS and others.
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The NCEAS Data Repository contains information about the research data sets collected and collated as part of NCEAS' funded activities. Information in the NCEAS Data Repository is concurrently available through the Knowledge Network for Biocomplexity (KNB), an international data repository. A number of the data sets were synthesized from multiple data sources that originated from the efforts of many contributors, while others originated from a single.
Datasets can be found at KNB repository https://knb.ecoinformatics.org/data , creator=NCEAS
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The Solar Data Analysis Center serves data from recent and current space-based solar-physics missions, funds and hosts much of the SolarSoft library, and leads the Virtual Solar Observatory (VSO) effort. SDAC is the active archive, providing network access to data from such missions as SOHO, Yohkoh, and TRACE.
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BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. BiGG integrates several published genome-scale metabolic networks into one resource with standard nomenclature which allows components to be compared across different organisms. BiGG can be used to browse model content, visualize metabolic pathway maps, and export SBML files of the models for further analysis by external software packages. Users may follow links from BiGG to several external databases to obtain additional information on genes, proteins, reactions, metabolites and citations of interest.
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<<<!!!<<< This repository is no longer available. It is part now of TERN Data Discovery Portal https://www.re3data.org/repository/r3d100012013 >>>!!!>>>
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Surface air temperature change is a primary measure of global climate change. The GISTEMP project started in the late 1970s to provide an estimate of the changing global surface air temperature which could be compared with the estimates obtained from climate models simulating the effect of changes in atmospheric carbon dioxide, volcanic aerosols, and solar irradiance. The continuing analysis updates global temperature change from the late 1800s to the present.
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Gemma is a database for the meta-analysis, re-use and sharing of genomics data, currently primarily targeted at the analysis of gene expression profiles. Gemma contains data from thousands of public studies, referencing thousands of published papers. Users can search, access and visualize co-expression and differential expression results.
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The AERONET (AErosol RObotic NETwork) program is a federation of ground-based remote sensing aerosol networks established by NASA and PHOTONS (PHOtométrie pour le Traitement Opérationnel de Normalisation Satellitaire; Univ. of Lille 1, CNES, and CNRS-INSU) and is greatly expanded by networks (e.g., RIMA, AeroSpan, AEROCAN, and CARSNET) and collaborators from national agencies, institutes, universities, individual scientists, and partners. The program provides a long-term, continuous and readily accessible public domain database of aerosol optical, microphysical and radiative properties for aerosol research and characterization, validation of satellite retrievals, and synergism with other databases. The network imposes standardization of instruments, calibration, processing and distribution.
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SAGE is a data and research platform that enables the secondary use of data related to child and youth development, health and well-being. It currently contains research data, and at a later stage we aim to also house administrative and community service delivery data. Technical infrastructure and governance processes are in place to ensure ethical use and the privacy of participants.
This dataverse provides metadata for the various data holdings available in SAGE (Secondary Analysis to Generate Evidence), a research data repository based in Edmonton Alberta and an intiative of PolicyWise for Children & Families. In general, SAGE contains data holdings too sensitive for open access. Each study lists a security level which indicates the procedure required to access the data.
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The Cooperative Association for Internet Data Analysis (CAIDA) is a collaborative undertaking among organizations in the commercial, government, and research sectors aimed at promoting greater cooperation in the engineering and maintenance of a robust, scalable global Internet infrastructure.It is an independent analysis and research group with particular focus on: Collection, curation, analysis, visualization, dissemination of sets of the best available Internet data, providing macroscopic insight into the behavior of Internet infrastructure worldwide, improving the integrity of the field of Internet science, improving the integrity of operational Internet measurement and management, informing science, technology, and communications public policies.
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The Scientific Registry of Transplant Recipients (SRTR) is an ever-expanding national database of transplantation statistics. Founded in 1987, the registry exists to support the ongoing evaluation of the scientific and clinical status of solid organ transplantation, including kidney, heart, liver, lung, intestine, and pancreas. Data in the registry are collected by the Organ Procurement and Transplantation Network (OPTN) from hospitals and organ procurement organizations (OPOs) across the country. The SRTR contains current and past information about the full continuum of transplant activity, from organ donation and waiting list candidates to transplant recipients and survival statistics. This information is used to help develop evidence-based policy, to support analysis of transplant programs and OPOs, and to encourage research on issues of importance to the transplant community.
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The Johanna Mestorf Academy provides data from several archaeology related projects. JMA supports open access/open data and open formats.
The JMA promotes research and education pertaining to the field of ‘Societal, Environmental, Cultural Change’ (Kiel SECC), which is one of the four research foci of CAU.
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AURIN is a collaborative national network of leading researchers and data providers across the academic, government, and private sectors. We provide a one-stop online workbench with access to thousands of multidisciplinary datasets, from over 100 different data sources.
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-05-17
